Sphingobium yanoikuyae peritonitis in peritoneal dialysis: a case report.

Authors

DOI:

https://doi.org/10.25796/bdd.v6i3.80703

Keywords:

peritoneal dialysis, Sphingobium yanoikuyae, peritonitis, antibotic resistance

Abstract

Full text : click on the pdf icon or https://bdd.rdplf.org/index.php/bdd/article/view/80703/72043

We report a rare clinical case of infection with the bacterium Sphingobium yanoikuyae in an 87-year-old patient undergoing peritoneal dialysis for end-stage renal failure. Sphingobium yanoikuyae is an aerobic, gram-negative bacterium known for its ability to degrade polycyclic aromatic hydrocarbons and its bioremediation potential. A member of the Sphingomonadaceae family, it has been identified in a variety of environments, including dialysis equipment.
After starting peritoneal dialysis, the patient developed an infectious syndrome. Bacteriological analysis of the peritoneal effluent revealed the presence of Sphingobium yanoikuyae in the dialysate. Appropriate antibiotic therapy with MEROPENEM was instituted as soon as the Sphyngobium antibiogram was obtained. A second bacterium, Shingomonas sp, was also identified later (resistant to MEROPENEM). Due to the favorable clinicobiological course, only Sphyngobium was considered responsible for the disease.
This is the first known case of human infection with Sphingobium yanoikuyae, and the third case of infection with a Sphingobium species in a peritoneal dialysis setting. The low prevalence of this germ in human infections suggests a low virulence of this bacterium. Nevertheless, this highlights the potential risk of nosocomial infections linked to this family of bacteria. This germ has shown antibiotic resistance, raising concerns about anti-infective resistance in opportunistic bacteria such as Sphingomonadaceae.
This case adds to our knowledge of rare, antibiotic-resistant infections in the hospital setting, particularly in vulnerable patients treated with peritoneal dialysis.

References

Gan HM, Gan HY, Ahmad NH, Aziz NA, Hudson AO, Savka MA. Whole genome sequencing and analysis reveal insights into the genetic structure, diversity and evolutionary relatedness of luxI and luxR homologs in bacteria belonging to the Sphingomonadaceae family. Front Cell Infect Microbiol. 2014;4:188. DOI: https://doi.org/10.3389/fcimb.2014.00188

Cunliffe M, Kertesz MA. Autecological properties of soil sphingomonads involved in the degradation of polycyclic aromatic hydrocarbons. Appl Microbiol Biotechnol. oct 2006;72(5):1083‑9. DOI: https://doi.org/10.1007/s00253-006-0374-x

Yabuuchi E, Yano I, Oyaizu H, Hashimoto Y, Ezaki T, Yamamoto H. Proposals of Sphingomonas paucimobilis gen. nov. and comb. nov., Sphingomonas parapaucimobilis sp. nov., Sphingomonas yanoikuyae sp. nov., Sphingomonas adhaesiva sp. nov., Sphingomonas capsulata comb. nov., and two genospecies of the genus Sphingomonas. Microbiol Immunol. 1990;34(2):99‑119. DOI: https://doi.org/10.1111/j.1348-0421.1990.tb00996.x

Takeuchi M, Hamana K, Hiraishi A. Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses. Int J Syst Evol Microbiol. juill 2001;51(Pt 4):1405‑17. DOI: https://doi.org/10.1099/00207713-51-4-1405

Parte AC, Sardà Carbasse J, Meier-Kolthoff JP, Reimer LC, Göker M. List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. Int J Syst Evol Microbiol. 2020;70(11):5607‑12. DOI: https://doi.org/10.1099/ijsem.0.004332

Guner Ozenen G, Sahbudak Bal Z, Bilen NM, Yildirim Arslan S, Aydemir S, Kurugol Z, et al. The First Report of Sphingomonas yanoikuyae as a Human Pathogen in a Child With a Central Nervous System Infection. Pediatr Infect Dis J. 1 déc 2021;40(12):e524. DOI: https://doi.org/10.1097/INF.0000000000003301

Lin JN, Lai CH, Chen YH, Lin HL, Huang CK, Chen WF, et al. Sphingomonas paucimobilis bacteremia in humans: 16 case reports and a literature review. J Microbiol Immunol Infect Wei Mian Yu Gan Ran Za Zhi. févr 2010;43(1):35‑42. DOI: https://doi.org/10.1016/S1684-1182(10)60005-9

Ruiter NM, Cnossen TT, Bakker RC, van Keulen PJH. Sphingobium olei peritonitis: peritoneal dialysis in turmoil? Perit Dial Int J Int Soc Perit Dial. 2013;33(1):102‑3. DOI: https://doi.org/10.3747/pdi.2012.00080

Palleti SK, Bavi SR, Fitzpatrick M, Wadhwa A. First Case Report of Sphingobium lactosutens as a Human Pathogen Causing Peritoneal Dialysis-Related Peritonitis. Cureus. juill 2022;14(7):e27293. DOI: https://doi.org/10.7759/cureus.27293

Millar Vernetti P, Dalamo K, Khan Z, Gonzalez-Duarte A, Frucht S, Kaufmann H. Meropenem-Induced Facial Myoclonus. Mov Disord Clin Pract. août 2023;10(Suppl 3):S21‑3. DOI: https://doi.org/10.1002/mdc3.13777

Norrby SR. Neurotoxicity of carbapenem antibacterials. Drug Saf. août 1996;15(2):87‑90. DOI: https://doi.org/10.2165/00002018-199615020-00001

Vaz-Moreira I, Nunes OC, Manaia CM. Diversity and antibiotic resistance patterns of Sphingomonadaceae isolates from drinking water. Appl Environ Microbiol. 15 août 2011;77(16):5697‑706. DOI: https://doi.org/10.1128/AEM.00579-11

Published

2023-11-13

How to Cite

1.
Mouradi S, Motte G, Torner S, Lebugle P, Petitboulanger N, Bemmerzouk A, Charles P-Y. Sphingobium yanoikuyae peritonitis in peritoneal dialysis: a case report. Bull Dial Domic [Internet]. 2023 Nov. 13 [cited 2024 Nov. 22];6(3):123-7. Available from: https://bdd.rdplf.org/index.php/bdd/article/view/80703